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wiki:alignment1 [2018/11/15 08:57]
erin
wiki:alignment1 [2018/11/15 09:02] (current)
erin
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   * Sequencing doo dads   * Sequencing doo dads
   * Assignment Slides   * Assignment Slides
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 +----
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 ====== Alignment ====== ====== Alignment ======
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 ---- ----
  
-Dataset ​we will use:+====== Example Data ====== 
 + 
 +**The dataset ​we will use is:**
  
 RNA-seq-based transcriptomic and metabolomic analysis reveal stress responses and programmed cell death induced by acetic acid in Saccharomyces cerevisiae. RNA-seq-based transcriptomic and metabolomic analysis reveal stress responses and programmed cell death induced by acetic acid in Saccharomyces cerevisiae.
 +Dong Y, Hu J, Fan L, and Chen Q. (2016) Scientific Reports. 7:4. DOI: [[https://​www.ncbi.nlm.nih.gov/​pubmed/​28209995|10.1038/​srep42659]].
  
  
 +{{ :​wiki:​dong_srep42659.pdf |}}
  
  
-{{ :wiki:dong_srep42659.pdf |}}+Here is the structure of the data: 
 + 
 +{{ :wiki:data_structure.jpg?​direct&​500 ​|}}
  
  
 [[wiki:​hisat2build|{{:​wiki:​slide2_arrow.png?​40|}}]][[wiki:​hisat2build|Building HISAT2 genome indices]] [[wiki:​hisat2build|{{:​wiki:​slide2_arrow.png?​40|}}]][[wiki:​hisat2build|Building HISAT2 genome indices]]
  
wiki/alignment1.1542297458.txt.gz · Last modified: 2018/11/15 08:57 by erin